Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 AL355877.3-201ENST00000622820 899 ntBASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 AL139288.1-201ENST00000623748 933 ntBASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 PRORSD1P-202ENST00000563365 2154 ntBASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 AC004817.3-201ENST00000602957 2129 ntBASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 AL356309.3-201ENST00000624132 1934 ntBASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 BX005266.1-201ENST00000473402 457 ntBASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 REXO1L6P-202ENST00000619970 1078 ntBASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 AC012313.10-201ENST00000623509 926 ntBASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM35BQ8NCS4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 NKAPP1-205ENST00000585790 367 ntBASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 AC008608.2-201ENST00000606089 416 ntBASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 AL022326.1-202ENST00000641533 845 ntBASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 AC060834.1-201ENST00000443027 2032 ntBASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms