Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 AC023274.1-201ENST00000418278 595 ntBASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 IGHV3-65-201ENST00000523210 341 ntBASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 AC008667.4-201ENST00000607370 168 ntBASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 AL691403.2-201ENST00000618460 490 ntBASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 AC141586.5-201ENST00000624546 2050 ntBASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHTF2Q8N3S3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 AC108073.2-201ENST00000464002 357 ntBASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 RPS15P9-201ENST00000494093 319 ntBASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 AC002347.1-201ENST00000569543 541 ntBASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.85■□□□□ 0.45
PHTF2Q8N3S3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 AC009336.1-201ENST00000608941 1553 ntBASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 AC084018.2-201ENST00000613093 2607 ntBASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 DNAJB3-201ENST00000446806 729 ntBASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 AC002558.1-201ENST00000488906 803 ntBASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 STK19B-204ENST00000512515 211 ntBASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHTF2Q8N3S3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms