Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 PMS2P4-201ENST00000412466 1052 ntBASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 SPCS2P4-201ENST00000436160 681 ntBASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 AC093214.1-201ENST00000511688 1107 ntBASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 AC069262.1-201ENST00000539058 672 ntBASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 GPS2P2-201ENST00000430745 888 ntBASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS4Q8IUM7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 TUBB3P1-201ENST00000405796 1332 ntBASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 RBPMS2P1-201ENST00000437762 623 ntBASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 IGHV3-62-201ENST00000520057 340 ntBASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 AC109635.5-201ENST00000533593 962 ntBASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 KRT8P23-201ENST00000560090 1207 ntBASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 AC138761.1-201ENST00000584393 385 ntBASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS4Q8IUM7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 AL353732.1-201ENST00000569618 1459 ntBASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms