Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.5□□□□□ -0.57
SCXQ7RTU7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCXQ7RTU7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.49□□□□□ -0.57
SCXQ7RTU7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 AL022342.1-201ENST00000400363 863 ntBASIC11.49□□□□□ -0.57
SCXQ7RTU7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 BNIP3P18-201ENST00000593976 575 ntBASIC11.49□□□□□ -0.57
SCXQ7RTU7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.49□□□□□ -0.57
SCXQ7RTU7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 AC112777.1-201ENST00000540175 1423 ntBASIC11.49□□□□□ -0.57
SCXQ7RTU7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SCXQ7RTU7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.49□□□□□ -0.57
SCXQ7RTU7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 MRPL3P1-201ENST00000400109 1033 ntBASIC11.48□□□□□ -0.57
SCXQ7RTU7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 POM121L3P-201ENST00000419331 1163 ntBASIC11.48□□□□□ -0.57
SCXQ7RTU7 AC106795.1-205ENST00000512851 1056 ntBASIC11.48□□□□□ -0.57
SCXQ7RTU7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 AC114341.1-201ENST00000618070 349 ntBASIC11.48□□□□□ -0.57
SCXQ7RTU7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
SCXQ7RTU7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SCXQ7RTU7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms