Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF444P1-201ENST00000559497 298 ntBASIC15.66■□□□□ 0.1
SHFQ7M4L6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.66■□□□□ 0.1
SHFQ7M4L6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 AL137013.1-201ENST00000432946 1228 ntBASIC15.65■□□□□ 0.1
SHFQ7M4L6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 AC005363.2-201ENST00000618631 242 ntBASIC15.65■□□□□ 0.1
SHFQ7M4L6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 AC093525.9-201ENST00000624961 1746 ntBASIC15.65■□□□□ 0.1
SHFQ7M4L6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 AC092068.3-201ENST00000587894 2016 ntBASIC15.65■□□□□ 0.1
SHFQ7M4L6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHFQ7M4L6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.65■□□□□ 0.1
SHFQ7M4L6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 IGHGP-201ENST00000390555 1178 ntBASIC15.64■□□□□ 0.09
SHFQ7M4L6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 SPDYE15P-201ENST00000424157 909 ntBASIC15.64■□□□□ 0.09
SHFQ7M4L6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 AC011558.1-201ENST00000623459 338 ntBASIC15.64■□□□□ 0.09
SHFQ7M4L6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
SHFQ7M4L6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHFQ7M4L6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms