Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 METTL21AP1-201ENST00000438852 635 ntBASIC21.67■■□□□ 1.06
COPS6Q7L5N1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
COPS6Q7L5N1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS6Q7L5N1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 EGFEM1P-202ENST00000431685 1563 ntBASIC21.65■■□□□ 1.06
COPS6Q7L5N1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 AC016396.2-201ENST00000562575 1417 ntBASIC21.65■■□□□ 1.06
COPS6Q7L5N1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 AC027612.4-201ENST00000605371 583 ntBASIC21.65■■□□□ 1.06
COPS6Q7L5N1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 AC093525.9-201ENST00000624961 1746 ntBASIC21.65■■□□□ 1.06
COPS6Q7L5N1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.65■■□□□ 1.06
COPS6Q7L5N1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.64■■□□□ 1.06
COPS6Q7L5N1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
COPS6Q7L5N1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COPS6Q7L5N1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.64■■□□□ 1.06
COPS6Q7L5N1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.64■■□□□ 1.06
COPS6Q7L5N1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 AC105339.1-204ENST00000636249 355 ntBASIC21.64■■□□□ 1.05
COPS6Q7L5N1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPS6Q7L5N1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms