Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 LINC02012-201ENST00000608206 1725 ntBASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 TERF1P1-201ENST00000311003 1181 ntBASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 STARP1-201ENST00000397973 869 ntBASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 AC005104.2-201ENST00000427818 678 ntBASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 YBX1P2-201ENST00000489612 999 ntBASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 AC097493.4-201ENST00000641197 219 ntBASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 AC073508.3-201ENST00000619697 1419 ntBASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PTCHD4Q6ZW05 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 AL162727.3-201ENST00000635661 2787 ntBASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 AL137013.1-201ENST00000432946 1228 ntBASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 KRT18P48-201ENST00000434763 852 ntBASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 AC005363.2-201ENST00000618631 242 ntBASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PTCHD4Q6ZW05 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD4Q6ZW05 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms