Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC092338.2-201ENST00000568827 1415 ntBASIC15.14■□□□□ 0.01
C11orf88Q6PI97 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 FLJ38576-201ENST00000623820 2459 ntBASIC15.14■□□□□ 0.01
C11orf88Q6PI97 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C11orf88Q6PI97 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 AC007663.1-201ENST00000438948 1240 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 COX11P1-201ENST00000489116 835 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 AC063952.2-201ENST00000498792 1227 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 AC022616.7-201ENST00000525383 220 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 NTF6B-201ENST00000591913 560 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 AL023803.3-201ENST00000615559 522 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf88Q6PI97 LINC02199-201ENST00000506655 2702 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 AC079328.2-201ENST00000561241 3354 ntBASIC15.13■□□□□ 0.01
C11orf88Q6PI97 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 AC006011.2-201ENST00000621313 1158 ntBASIC15.12■□□□□ 0.01
C11orf88Q6PI97 AL138966.2-201ENST00000621997 464 ntBASIC15.12■□□□□ 0.01
C11orf88Q6PI97 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 AC133963.1-201ENST00000504166 1679 ntBASIC15.12■□□□□ 0.01
C11orf88Q6PI97 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms