Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 AP000842.3-202ENST00000569238 1080 ntBASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 AL138781.2-201ENST00000617896 1843 ntBASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 LYSMD4-203ENST00000378904 2122 ntBASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 AC090164.3-201ENST00000610780 2143 ntBASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 AC027307.2-201ENST00000591252 911 ntBASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR3Q6P9H4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 GNAS-203ENST00000306120 1878 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 LINC00304-203ENST00000565008 1864 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 MIR346-201ENST00000362234 95 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 RNU1-129P-201ENST00000384064 167 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 AC092580.3-201ENST00000430932 139 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 U1.21-201ENST00000580816 167 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 AL031055.1-201ENST00000606362 631 ntBASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNKSR3Q6P9H4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNKSR3Q6P9H4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNKSR3Q6P9H4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 AC093503.3-201ENST00000624917 2352 ntBASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNKSR3Q6P9H4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms