Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 UNC93B7-201ENST00000509439 705 ntBASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 MTDHP4-201ENST00000600287 670 ntBASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 AL353135.1-201ENST00000606729 504 ntBASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEM35AQ53FP2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 AC139887.3-201ENST00000568585 713 ntBASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM35AQ53FP2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM35AQ53FP2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM35AQ53FP2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 AC064862.7-201ENST00000604520 867 ntBASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35AQ53FP2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEM35AQ53FP2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35AQ53FP2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35AQ53FP2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms