Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 LINC02012-201ENST00000608206 1725 ntBASIC13□□□□□ -0.33
LINC01559Q495D7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13□□□□□ -0.33
LINC01559Q495D7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13□□□□□ -0.33
LINC01559Q495D7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13□□□□□ -0.33
LINC01559Q495D7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 TSPY14P-201ENST00000303979 915 ntBASIC13□□□□□ -0.33
LINC01559Q495D7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC13□□□□□ -0.33
LINC01559Q495D7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13□□□□□ -0.33
LINC01559Q495D7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13□□□□□ -0.33
LINC01559Q495D7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13□□□□□ -0.33
LINC01559Q495D7 FAM201B-201ENST00000458407 597 ntBASIC13□□□□□ -0.33
LINC01559Q495D7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13□□□□□ -0.33
LINC01559Q495D7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LINC01559Q495D7 AC142381.4-202ENST00000563973 229 ntBASIC13□□□□□ -0.33
LINC01559Q495D7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13□□□□□ -0.33
LINC01559Q495D7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13□□□□□ -0.33
LINC01559Q495D7 AL139327.4-201ENST00000612362 153 ntBASIC13□□□□□ -0.33
LINC01559Q495D7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13□□□□□ -0.33
LINC01559Q495D7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC01559Q495D7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13□□□□□ -0.33
LINC01559Q495D7 AC005915.1-201ENST00000624912 2018 ntBASIC13□□□□□ -0.33
LINC01559Q495D7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01559Q495D7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 DOC2GP-204ENST00000639052 2548 ntBASIC12.99□□□□□ -0.33
LINC01559Q495D7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 SEPHS1P7-201ENST00000452995 1177 ntBASIC12.99□□□□□ -0.33
LINC01559Q495D7 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 RNU6-751P-201ENST00000516382 101 ntBASIC12.99□□□□□ -0.33
LINC01559Q495D7 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 AP000525.1-201ENST00000608286 694 ntBASIC12.99□□□□□ -0.33
LINC01559Q495D7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 AC020763.2-201ENST00000623155 1255 ntBASIC12.99□□□□□ -0.33
LINC01559Q495D7 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 AL590396.2-201ENST00000636511 1041 ntBASIC12.99□□□□□ -0.33
LINC01559Q495D7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01559Q495D7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01559Q495D7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms