Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 HLA-A-202ENST00000376806 1854 ntBASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
ERCC6LQ2NKX8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC6LQ2NKX8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 ESRRAP1-201ENST00000400596 1257 ntBASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC6LQ2NKX8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 AC096733.2-201ENST00000609937 1394 ntBASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC6LQ2NKX8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms