Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH17Q12864 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 AC011676.5-201ENST00000624864 2660 ntBASIC17.46■□□□□ 0.39
CDH17Q12864 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDH17Q12864 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH17Q12864 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 SPDYE21P-201ENST00000413323 827 ntBASIC17.46■□□□□ 0.39
CDH17Q12864 ABCD1P5-201ENST00000445663 754 ntBASIC17.46■□□□□ 0.39
CDH17Q12864 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH17Q12864 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH17Q12864 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH17Q12864 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH17Q12864 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDH17Q12864 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDH17Q12864 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CDH17Q12864 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH17Q12864 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH17Q12864 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH17Q12864 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH17Q12864 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH17Q12864 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH17Q12864 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 KRT16P4-201ENST00000453883 522 ntBASIC17.45■□□□□ 0.38
CDH17Q12864 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH17Q12864 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 AL591684.3-201ENST00000605187 298 ntBASIC17.45■□□□□ 0.38
CDH17Q12864 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 AC148477.5-201ENST00000625164 1645 ntBASIC17.45■□□□□ 0.38
CDH17Q12864 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH17Q12864 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 SIGLEC16-201ENST00000599858 1437 ntBASIC17.45■□□□□ 0.38
CDH17Q12864 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH17Q12864 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CDH17Q12864 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH17Q12864 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDH17Q12864 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH17Q12864 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH17Q12864 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDH17Q12864 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH17Q12864 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH17Q12864 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH17Q12864 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH17Q12864 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.44■□□□□ 0.38
CDH17Q12864 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH17Q12864 AC138894.3-201ENST00000603787 634 ntBASIC17.44■□□□□ 0.38
CDH17Q12864 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH17Q12864 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDH17Q12864 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH17Q12864 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 AC106886.4-201ENST00000623557 2502 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms