Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SEC61A1P61619 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
SEC61A1P61619 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.19■□□□□ 0.02
SEC61A1P61619 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.19■□□□□ 0.02
SEC61A1P61619 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SEC61A1P61619 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.19■□□□□ 0.02
SEC61A1P61619 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SEC61A1P61619 AGGF1P2-201ENST00000426656 2106 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.19■□□□□ 0.02
SEC61A1P61619 CROCCP2-202ENST00000412962 2773 ntBASIC15.19■□□□□ 0.02
SEC61A1P61619 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SEC61A1P61619 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SEC61A1P61619 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.18■□□□□ 0.02
SEC61A1P61619 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SEC61A1P61619 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SEC61A1P61619 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.18■□□□□ 0.02
SEC61A1P61619 IGHGP-201ENST00000390555 1178 ntBASIC15.18■□□□□ 0.02
SEC61A1P61619 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SEC61A1P61619 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SEC61A1P61619 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SEC61A1P61619 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SEC61A1P61619 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 KRT18P1-202ENST00000452408 1331 ntBASIC15.17■□□□□ 0.02
SEC61A1P61619 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SEC61A1P61619 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SEC61A1P61619 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SEC61A1P61619 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.17■□□□□ 0.02
SEC61A1P61619 DUSP5P1-201ENST00000441325 1139 ntBASIC15.17■□□□□ 0.02
SEC61A1P61619 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.17■□□□□ 0.02
SEC61A1P61619 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 LINC02199-201ENST00000506655 2702 ntBASIC15.17■□□□□ 0.02
SEC61A1P61619 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.17■□□□□ 0.02
SEC61A1P61619 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.17■□□□□ 0.02
SEC61A1P61619 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SEC61A1P61619 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SEC61A1P61619 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms