Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
RAB5BP61020 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB5BP61020 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RAB5BP61020 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB5BP61020 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB5BP61020 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB5BP61020 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
RAB5BP61020 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB5BP61020 AL591742.1-201ENST00000604433 565 ntBASIC13.52□□□□□ -0.25
RAB5BP61020 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.52□□□□□ -0.25
RAB5BP61020 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RAB5BP61020 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB5BP61020 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
RAB5BP61020 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RAB5BP61020 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB5BP61020 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RAB5BP61020 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB5BP61020 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB5BP61020 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RAB5BP61020 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 MTHFR-217ENST00000641820 1569 ntBASIC13.51□□□□□ -0.25
RAB5BP61020 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 AC016396.2-201ENST00000562575 1417 ntBASIC13.51□□□□□ -0.25
RAB5BP61020 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 AC019069.1-201ENST00000610008 1333 ntBASIC13.51□□□□□ -0.25
RAB5BP61020 IRS3P-201ENST00000223076 1006 ntBASIC13.51□□□□□ -0.25
RAB5BP61020 UNC93B3-201ENST00000308076 687 ntBASIC13.51□□□□□ -0.25
RAB5BP61020 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 MCRIP2P1-201ENST00000394346 511 ntBASIC13.51□□□□□ -0.25
RAB5BP61020 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 AC099791.1-201ENST00000416440 715 ntBASIC13.51□□□□□ -0.25
RAB5BP61020 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB5BP61020 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAB5BP61020 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB5BP61020 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB5BP61020 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB5BP61020 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB5BP61020 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RAB5BP61020 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB5BP61020 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB5BP61020 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB5BP61020 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RAB5BP61020 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB5BP61020 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB5BP61020 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms