Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CHMP4BP1P59074 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.77■□□□□ 0.76
CHMP4BP1P59074 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP4BP1P59074 AL022326.1-202ENST00000641533 845 ntBASIC19.77■□□□□ 0.76
CHMP4BP1P59074 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CHMP4BP1P59074 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP4BP1P59074 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP4BP1P59074 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CHMP4BP1P59074 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.77■□□□□ 0.75
CHMP4BP1P59074 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP4BP1P59074 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP4BP1P59074 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.77■□□□□ 0.75
CHMP4BP1P59074 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 AC079776.2-201ENST00000641154 1609 ntBASIC19.76■□□□□ 0.75
CHMP4BP1P59074 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 LAGE3P1-201ENST00000425356 484 ntBASIC19.76■□□□□ 0.75
CHMP4BP1P59074 AL591424.1-201ENST00000442569 1213 ntBASIC19.76■□□□□ 0.75
CHMP4BP1P59074 RNA5SP416-201ENST00000516838 111 ntBASIC19.76■□□□□ 0.75
CHMP4BP1P59074 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4BP1P59074 AC108860.2-201ENST00000562760 2183 ntBASIC19.76■□□□□ 0.75
CHMP4BP1P59074 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 REXO1L9P-201ENST00000604264 2108 ntBASIC19.75■□□□□ 0.75
CHMP4BP1P59074 AC097374.2-201ENST00000618617 1306 ntBASIC19.75■□□□□ 0.75
CHMP4BP1P59074 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4BP1P59074 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 PMPCAP1-201ENST00000508114 1576 ntBASIC19.74■□□□□ 0.75
CHMP4BP1P59074 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 MIR3687-2-201ENST00000577708 61 ntBASIC19.74■□□□□ 0.75
CHMP4BP1P59074 MIR3687-1-201ENST00000614492 61 ntBASIC19.74■□□□□ 0.75
CHMP4BP1P59074 AC073592.5-201ENST00000624854 528 ntBASIC19.74■□□□□ 0.75
CHMP4BP1P59074 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHMP4BP1P59074 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms