Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RHBDL3P58872 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDL3P58872 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDL3P58872 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RHBDL3P58872 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RHBDL3P58872 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHBDL3P58872 SLC22A20-204ENST00000530038 1673 ntBASIC20.26■□□□□ 0.83
RHBDL3P58872 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RHBDL3P58872 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.25■□□□□ 0.83
RHBDL3P58872 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.25■□□□□ 0.83
RHBDL3P58872 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.25■□□□□ 0.83
RHBDL3P58872 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RHBDL3P58872 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.25■□□□□ 0.83
RHBDL3P58872 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RHBDL3P58872 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RHBDL3P58872 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RHBDL3P58872 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RHBDL3P58872 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHBDL3P58872 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
RHBDL3P58872 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RHBDL3P58872 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.24■□□□□ 0.83
RHBDL3P58872 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 TIMM8BP1-201ENST00000452384 211 ntBASIC20.24■□□□□ 0.83
RHBDL3P58872 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.24■□□□□ 0.83
RHBDL3P58872 AC109322.1-201ENST00000524499 1264 ntBASIC20.24■□□□□ 0.83
RHBDL3P58872 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
RHBDL3P58872 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 AC243562.1-201ENST00000560672 389 ntBASIC20.24■□□□□ 0.83
RHBDL3P58872 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
RHBDL3P58872 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.24■□□□□ 0.83
RHBDL3P58872 GNAS-203ENST00000306120 1878 ntBASIC20.24■□□□□ 0.83
RHBDL3P58872 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.24■□□□□ 0.83
RHBDL3P58872 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RHBDL3P58872 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.24■□□□□ 0.83
RHBDL3P58872 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.23■□□□□ 0.83
RHBDL3P58872 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RHBDL3P58872 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.23■□□□□ 0.83
RHBDL3P58872 FRMD8P1-201ENST00000440433 1524 ntBASIC20.23■□□□□ 0.83
RHBDL3P58872 AC012569.1-201ENST00000591191 1524 ntBASIC20.23■□□□□ 0.83
RHBDL3P58872 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RHBDL3P58872 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.23■□□□□ 0.83
RHBDL3P58872 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RHBDL3P58872 AC007613.1-201ENST00000572811 2597 ntBASIC20.23■□□□□ 0.83
RHBDL3P58872 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RHBDL3P58872 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 AC023141.5-201ENST00000458585 616 ntBASIC20.23■□□□□ 0.83
RHBDL3P58872 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.23■□□□□ 0.83
RHBDL3P58872 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.23■□□□□ 0.83
RHBDL3P58872 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
RHBDL3P58872 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.23■□□□□ 0.83
RHBDL3P58872 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.23■□□□□ 0.83
RHBDL3P58872 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms