Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCL23P55773 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCL23P55773 GNAS-203ENST00000306120 1878 ntBASIC18.66■□□□□ 0.58
CCL23P55773 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL23P55773 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL23P55773 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL23P55773 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL23P55773 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCL23P55773 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL23P55773 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL23P55773 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCL23P55773 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 AC087289.5-201ENST00000586076 3175 ntBASIC18.65■□□□□ 0.58
CCL23P55773 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCL23P55773 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL23P55773 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL23P55773 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 RNF165-205ENST00000588679 2904 ntBASIC18.65■□□□□ 0.58
CCL23P55773 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCL23P55773 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL23P55773 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL23P55773 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.65■□□□□ 0.58
CCL23P55773 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.65■□□□□ 0.58
CCL23P55773 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 AC069120.2-201ENST00000524091 540 ntBASIC18.65■□□□□ 0.58
CCL23P55773 KRT8P23-201ENST00000560090 1207 ntBASIC18.65■□□□□ 0.58
CCL23P55773 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.65■□□□□ 0.58
CCL23P55773 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL23P55773 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL23P55773 AL009183.1-201ENST00000603760 355 ntBASIC18.65■□□□□ 0.58
CCL23P55773 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCL23P55773 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCL23P55773 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL23P55773 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL23P55773 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCL23P55773 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL23P55773 AP000974.1-201ENST00000623909 2387 ntBASIC18.64■□□□□ 0.58
CCL23P55773 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCL23P55773 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL23P55773 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.64■□□□□ 0.57
CCL23P55773 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL23P55773 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL23P55773 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.64■□□□□ 0.57
CCL23P55773 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL23P55773 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCL23P55773 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL23P55773 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.64■□□□□ 0.57
CCL23P55773 AL158211.3-201ENST00000607385 239 ntBASIC18.64■□□□□ 0.57
CCL23P55773 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL23P55773 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCL23P55773 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL23P55773 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCL23P55773 AC012569.1-201ENST00000591191 1524 ntBASIC18.64■□□□□ 0.57
CCL23P55773 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL23P55773 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CCL23P55773 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL23P55773 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
CCL23P55773 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL23P55773 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCL23P55773 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL23P55773 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL23P55773 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL23P55773 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.63■□□□□ 0.57
CCL23P55773 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCL23P55773 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL23P55773 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL23P55773 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCL23P55773 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCL23P55773 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL23P55773 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCL23P55773 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL23P55773 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL23P55773 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL23P55773 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL23P55773 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL23P55773 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL23P55773 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCL23P55773 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms