Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.89■□□□□ 0.61
ACLYP53396 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.89■□□□□ 0.61
ACLYP53396 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.89■□□□□ 0.61
ACLYP53396 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.89■□□□□ 0.61
ACLYP53396 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.89■□□□□ 0.61
ACLYP53396 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.89■□□□□ 0.61
ACLYP53396 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.89■□□□□ 0.61
ACLYP53396 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ACLYP53396 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.88■□□□□ 0.61
ACLYP53396 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.88■□□□□ 0.61
ACLYP53396 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.88■□□□□ 0.61
ACLYP53396 ALG1L8P-201ENST00000533887 760 ntBASIC18.88■□□□□ 0.61
ACLYP53396 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.88■□□□□ 0.61
ACLYP53396 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ACLYP53396 WASH6P-202ENST00000359512 1437 ntBASIC18.88■□□□□ 0.61
ACLYP53396 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.88■□□□□ 0.61
ACLYP53396 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.88■□□□□ 0.61
ACLYP53396 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.88■□□□□ 0.61
ACLYP53396 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 GNAS-203ENST00000306120 1878 ntBASIC18.88■□□□□ 0.61
ACLYP53396 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.88■□□□□ 0.61
ACLYP53396 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACLYP53396 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
ACLYP53396 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ACLYP53396 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.87■□□□□ 0.61
ACLYP53396 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.87■□□□□ 0.61
ACLYP53396 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.87■□□□□ 0.61
ACLYP53396 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.87■□□□□ 0.61
ACLYP53396 AP005018.1-201ENST00000525475 301 ntBASIC18.87■□□□□ 0.61
ACLYP53396 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.87■□□□□ 0.61
ACLYP53396 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
ACLYP53396 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.87■□□□□ 0.61
ACLYP53396 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.87■□□□□ 0.61
ACLYP53396 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.87■□□□□ 0.61
ACLYP53396 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ACLYP53396 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACLYP53396 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.86■□□□□ 0.61
ACLYP53396 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
ACLYP53396 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
ACLYP53396 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.86■□□□□ 0.61
ACLYP53396 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.86■□□□□ 0.61
ACLYP53396 AC092580.3-201ENST00000430932 139 ntBASIC18.86■□□□□ 0.61
ACLYP53396 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.86■□□□□ 0.61
ACLYP53396 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.86■□□□□ 0.61
ACLYP53396 AC008267.7-201ENST00000624570 1194 ntBASIC18.86■□□□□ 0.61
ACLYP53396 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
ACLYP53396 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACLYP53396 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ACLYP53396 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
ACLYP53396 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ACLYP53396 AC138028.4-201ENST00000564984 1845 ntBASIC18.86■□□□□ 0.61
ACLYP53396 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ACLYP53396 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms