Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.47■□□□□ 0.71
USP11P51784 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.47■□□□□ 0.71
USP11P51784 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.47■□□□□ 0.71
USP11P51784 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.46■□□□□ 0.71
USP11P51784 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.46■□□□□ 0.71
USP11P51784 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.46■□□□□ 0.71
USP11P51784 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP11P51784 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.46■□□□□ 0.71
USP11P51784 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.46■□□□□ 0.71
USP11P51784 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.46■□□□□ 0.71
USP11P51784 AC034105.1-201ENST00000563488 319 ntBASIC19.46■□□□□ 0.71
USP11P51784 AC106730.1-201ENST00000566722 1090 ntBASIC19.46■□□□□ 0.71
USP11P51784 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.46■□□□□ 0.71
USP11P51784 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
USP11P51784 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.46■□□□□ 0.71
USP11P51784 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.46■□□□□ 0.71
USP11P51784 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP11P51784 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.46■□□□□ 0.71
USP11P51784 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP11P51784 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 AC108860.2-201ENST00000562760 2183 ntBASIC19.46■□□□□ 0.71
USP11P51784 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP11P51784 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP11P51784 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP11P51784 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.45■□□□□ 0.7
USP11P51784 PRSS29P-201ENST00000440800 595 ntBASIC19.45■□□□□ 0.7
USP11P51784 AC108073.2-201ENST00000464002 357 ntBASIC19.45■□□□□ 0.7
USP11P51784 AC108751.1-201ENST00000490852 363 ntBASIC19.45■□□□□ 0.7
USP11P51784 SLC25A1P1-201ENST00000528351 927 ntBASIC19.45■□□□□ 0.7
USP11P51784 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.45■□□□□ 0.7
USP11P51784 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP11P51784 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.45■□□□□ 0.7
USP11P51784 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
USP11P51784 HTR7P1-202ENST00000624664 4411 ntBASIC19.45■□□□□ 0.7
USP11P51784 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP11P51784 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.45■□□□□ 0.7
USP11P51784 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP11P51784 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
USP11P51784 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP11P51784 ZNF259P1-201ENST00000407656 1365 ntBASIC19.44■□□□□ 0.7
USP11P51784 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.44■□□□□ 0.7
USP11P51784 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.44■□□□□ 0.7
USP11P51784 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 AC104109.2-201ENST00000602919 1418 ntBASIC19.44■□□□□ 0.7
USP11P51784 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.44■□□□□ 0.7
USP11P51784 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
USP11P51784 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.44■□□□□ 0.7
USP11P51784 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP11P51784 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
USP11P51784 AC124947.2-201ENST00000547118 1133 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms