Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC11.01□□□□□ -0.65
UBE2AP49459 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UBE2AP49459 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2AP49459 AC124067.4-201ENST00000519691 2379 ntBASIC11.01□□□□□ -0.65
UBE2AP49459 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
UBE2AP49459 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11□□□□□ -0.65
UBE2AP49459 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UBE2AP49459 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 BX276092.7-203ENST00000637198 1536 ntBASIC11□□□□□ -0.65
UBE2AP49459 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11□□□□□ -0.65
UBE2AP49459 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 IGHGP-201ENST00000390555 1178 ntBASIC11□□□□□ -0.65
UBE2AP49459 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11□□□□□ -0.65
UBE2AP49459 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11□□□□□ -0.65
UBE2AP49459 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11□□□□□ -0.65
UBE2AP49459 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11□□□□□ -0.65
UBE2AP49459 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11□□□□□ -0.65
UBE2AP49459 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 AC012306.2-201ENST00000609350 630 ntBASIC11□□□□□ -0.65
UBE2AP49459 GXYLT1P4-201ENST00000613576 1192 ntBASIC11□□□□□ -0.65
UBE2AP49459 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 AC133963.1-201ENST00000504166 1679 ntBASIC11□□□□□ -0.65
UBE2AP49459 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11□□□□□ -0.65
UBE2AP49459 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11□□□□□ -0.65
UBE2AP49459 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2AP49459 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
UBE2AP49459 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
UBE2AP49459 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
UBE2AP49459 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
UBE2AP49459 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
UBE2AP49459 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2AP49459 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 AC112698.1-201ENST00000510299 916 ntBASIC10.99□□□□□ -0.65
UBE2AP49459 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2AP49459 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC10.99□□□□□ -0.65
UBE2AP49459 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2AP49459 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 LINC01451-201ENST00000623792 534 ntBASIC10.99□□□□□ -0.65
UBE2AP49459 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UBE2AP49459 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2AP49459 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms