Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.25■□□□□ 0.67
CENPFP49454 AC004790.1-201ENST00000612686 536 ntBASIC19.25■□□□□ 0.67
CENPFP49454 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.25■□□□□ 0.67
CENPFP49454 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.25■□□□□ 0.67
CENPFP49454 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.25■□□□□ 0.67
CENPFP49454 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.25■□□□□ 0.67
CENPFP49454 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.25■□□□□ 0.67
CENPFP49454 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 MYCLP1-201ENST00000372451 1075 ntBASIC19.25■□□□□ 0.67
CENPFP49454 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CENPFP49454 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.25■□□□□ 0.67
CENPFP49454 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 AL512638.1-201ENST00000457493 794 ntBASIC19.25■□□□□ 0.67
CENPFP49454 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.25■□□□□ 0.67
CENPFP49454 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.24■□□□□ 0.67
CENPFP49454 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
CENPFP49454 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 HCG4-201ENST00000418983 998 ntBASIC19.24■□□□□ 0.67
CENPFP49454 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.24■□□□□ 0.67
CENPFP49454 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.24■□□□□ 0.67
CENPFP49454 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.24■□□□□ 0.67
CENPFP49454 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.24■□□□□ 0.67
CENPFP49454 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 WASH6P-202ENST00000359512 1437 ntBASIC19.24■□□□□ 0.67
CENPFP49454 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.24■□□□□ 0.67
CENPFP49454 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
CENPFP49454 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CENPFP49454 AC099568.2-201ENST00000609194 695 ntBASIC19.24■□□□□ 0.67
CENPFP49454 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.24■□□□□ 0.67
CENPFP49454 AC007541.1-201ENST00000570282 1469 ntBASIC19.24■□□□□ 0.67
CENPFP49454 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CENPFP49454 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CENPFP49454 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CENPFP49454 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.23■□□□□ 0.67
CENPFP49454 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 AP000974.1-201ENST00000623909 2387 ntBASIC19.23■□□□□ 0.67
CENPFP49454 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CENPFP49454 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.23■□□□□ 0.67
CENPFP49454 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.23■□□□□ 0.67
CENPFP49454 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.23■□□□□ 0.67
CENPFP49454 ALG1L8P-201ENST00000533887 760 ntBASIC19.23■□□□□ 0.67
CENPFP49454 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.23■□□□□ 0.67
CENPFP49454 AC140912.1-201ENST00000577171 1054 ntBASIC19.23■□□□□ 0.67
CENPFP49454 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.23■□□□□ 0.67
CENPFP49454 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CENPFP49454 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CENPFP49454 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CENPFP49454 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CENPFP49454 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CENPFP49454 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.23■□□□□ 0.67
CENPFP49454 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CENPFP49454 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.23■□□□□ 0.67
CENPFP49454 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CENPFP49454 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.23■□□□□ 0.67
CENPFP49454 AC004840.1-201ENST00000636359 365 ntBASIC19.23■□□□□ 0.67
CENPFP49454 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CENPFP49454 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CENPFP49454 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.22■□□□□ 0.67
CENPFP49454 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms