Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX2-1P43699 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX2-1P43699 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-1P43699 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-1P43699 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-1P43699 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX2-1P43699 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-1P43699 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX2-1P43699 RPS2P55-201ENST00000397318 883 ntBASIC14.18□□□□□ -0.14
NKX2-1P43699 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 AC107956.1-201ENST00000494359 873 ntBASIC14.18□□□□□ -0.14
NKX2-1P43699 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX2-1P43699 MIR3917-201ENST00000580971 93 ntBASIC14.18□□□□□ -0.14
NKX2-1P43699 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX2-1P43699 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-1P43699 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NKX2-1P43699 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX2-1P43699 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-1P43699 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-1P43699 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX2-1P43699 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-1P43699 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
NKX2-1P43699 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-1P43699 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-1P43699 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-1P43699 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-1P43699 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX2-1P43699 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.17□□□□□ -0.14
NKX2-1P43699 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.17□□□□□ -0.14
NKX2-1P43699 TMEM191A-211ENST00000637163 1067 ntBASIC14.17□□□□□ -0.14
NKX2-1P43699 AC116562.4-202ENST00000641738 218 ntBASIC14.17□□□□□ -0.14
NKX2-1P43699 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NKX2-1P43699 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 AC022188.1-201ENST00000620960 1664 ntBASIC14.17□□□□□ -0.14
NKX2-1P43699 AL596257.1-201ENST00000641463 2694 ntBASIC14.17□□□□□ -0.14
NKX2-1P43699 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-1P43699 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-1P43699 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms