Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL35P42766 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RPL35P42766 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.97□□□□□ -0.17
RPL35P42766 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.97□□□□□ -0.17
RPL35P42766 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL35P42766 KRT18P41-201ENST00000518924 1277 ntBASIC13.97□□□□□ -0.17
RPL35P42766 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.97□□□□□ -0.17
RPL35P42766 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.97□□□□□ -0.17
RPL35P42766 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 AC133552.2-202ENST00000575694 574 ntBASIC13.97□□□□□ -0.17
RPL35P42766 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.97□□□□□ -0.17
RPL35P42766 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL35P42766 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL35P42766 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 AC126335.2-201ENST00000623362 4637 ntBASIC13.97□□□□□ -0.17
RPL35P42766 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RPL35P42766 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RPL35P42766 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RPL35P42766 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL35P42766 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL35P42766 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RPL35P42766 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 RCC2P3-201ENST00000418112 1537 ntBASIC13.96□□□□□ -0.17
RPL35P42766 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.96□□□□□ -0.17
RPL35P42766 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RPL35P42766 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 AC006015.1-201ENST00000429970 570 ntBASIC13.96□□□□□ -0.17
RPL35P42766 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.96□□□□□ -0.17
RPL35P42766 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RPL35P42766 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL35P42766 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RPL35P42766 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL35P42766 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL35P42766 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.96□□□□□ -0.18
RPL35P42766 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL35P42766 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
RPL35P42766 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL35P42766 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.96□□□□□ -0.18
RPL35P42766 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL35P42766 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL35P42766 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RPL35P42766 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL35P42766 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL35P42766 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL35P42766 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
RPL35P42766 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL35P42766 AL355312.1-201ENST00000407115 2176 ntBASIC13.95□□□□□ -0.18
RPL35P42766 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.95□□□□□ -0.18
RPL35P42766 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.95□□□□□ -0.18
RPL35P42766 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL35P42766 CICP20-201ENST00000443330 2801 ntBASIC13.95□□□□□ -0.18
RPL35P42766 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.95□□□□□ -0.18
RPL35P42766 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL35P42766 POU5F1P3-201ENST00000428824 1078 ntBASIC13.95□□□□□ -0.18
RPL35P42766 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms