Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
NCAPD3P42695 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
NCAPD3P42695 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC30.02■■■□□ 2.4
NCAPD3P42695 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC30.02■■■□□ 2.4
NCAPD3P42695 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC30.02■■■□□ 2.4
NCAPD3P42695 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC30.01■■■□□ 2.4
NCAPD3P42695 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC30.01■■■□□ 2.4
NCAPD3P42695 TTTY23B-201ENST00000442790 549 ntBASIC30.01■■■□□ 2.4
NCAPD3P42695 COX11-210ENST00000639671 696 ntBASIC30.01■■■□□ 2.4
NCAPD3P42695 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
NCAPD3P42695 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
NCAPD3P42695 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
NCAPD3P42695 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC30.01■■■□□ 2.39
NCAPD3P42695 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
NCAPD3P42695 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NCAPD3P42695 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NCAPD3P42695 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NCAPD3P42695 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
NCAPD3P42695 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC30■■■□□ 2.39
NCAPD3P42695 ORC6-206ENST00000568364 888 ntTSL 5 BASIC30■■■□□ 2.39
NCAPD3P42695 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NCAPD3P42695 AL589739.1-201ENST00000607720 493 ntBASIC30■■■□□ 2.39
NCAPD3P42695 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC30■■■□□ 2.39
NCAPD3P42695 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NCAPD3P42695 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NCAPD3P42695 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC30■■■□□ 2.39
NCAPD3P42695 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
NCAPD3P42695 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
NCAPD3P42695 REXO1L6P-201ENST00000603433 1515 ntBASIC30■■■□□ 2.39
NCAPD3P42695 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
NCAPD3P42695 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
NCAPD3P42695 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NCAPD3P42695 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
NCAPD3P42695 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC29.99■■■□□ 2.39
NCAPD3P42695 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC29.99■■■□□ 2.39
NCAPD3P42695 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC29.99■■■□□ 2.39
NCAPD3P42695 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC29.99■■■□□ 2.39
NCAPD3P42695 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC29.99■■■□□ 2.39
NCAPD3P42695 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC29.99■■■□□ 2.39
NCAPD3P42695 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NCAPD3P42695 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NCAPD3P42695 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC29.99■■■□□ 2.39
NCAPD3P42695 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
NCAPD3P42695 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NCAPD3P42695 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC29.99■■■□□ 2.39
NCAPD3P42695 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
NCAPD3P42695 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
NCAPD3P42695 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NCAPD3P42695 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
NCAPD3P42695 AL512361.1-201ENST00000554200 418 ntBASIC29.99■■■□□ 2.39
NCAPD3P42695 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC29.99■■■□□ 2.39
NCAPD3P42695 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NCAPD3P42695 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC29.98■■■□□ 2.39
NCAPD3P42695 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NCAPD3P42695 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NCAPD3P42695 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NCAPD3P42695 AL079307.3-201ENST00000556114 283 ntBASIC29.98■■■□□ 2.39
NCAPD3P42695 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NCAPD3P42695 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC29.98■■■□□ 2.39
NCAPD3P42695 AC099568.2-201ENST00000609194 695 ntBASIC29.98■■■□□ 2.39
NCAPD3P42695 LINC01451-201ENST00000623792 534 ntBASIC29.98■■■□□ 2.39
NCAPD3P42695 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NCAPD3P42695 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC29.97■■■□□ 2.39
NCAPD3P42695 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
NCAPD3P42695 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC29.97■■■□□ 2.39
NCAPD3P42695 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC29.97■■■□□ 2.39
NCAPD3P42695 AC004945.1-201ENST00000416738 983 ntBASIC29.97■■■□□ 2.39
NCAPD3P42695 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC29.97■■■□□ 2.39
NCAPD3P42695 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC29.97■■■□□ 2.39
NCAPD3P42695 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC29.97■■■□□ 2.39
NCAPD3P42695 AP005482.1-201ENST00000563722 1273 ntBASIC29.97■■■□□ 2.39
NCAPD3P42695 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC29.97■■■□□ 2.39
NCAPD3P42695 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC29.97■■■□□ 2.39
NCAPD3P42695 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
NCAPD3P42695 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC29.97■■■□□ 2.39
NCAPD3P42695 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NCAPD3P42695 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NCAPD3P42695 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NCAPD3P42695 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NCAPD3P42695 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC29.96■■■□□ 2.39
NCAPD3P42695 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC29.96■■■□□ 2.39
NCAPD3P42695 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC29.96■■■□□ 2.39
NCAPD3P42695 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
NCAPD3P42695 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NCAPD3P42695 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
NCAPD3P42695 AC114501.2-201ENST00000439631 535 ntBASIC29.96■■■□□ 2.39
NCAPD3P42695 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC29.96■■■□□ 2.39
NCAPD3P42695 AC055876.2-201ENST00000531834 546 ntBASIC29.96■■■□□ 2.39
NCAPD3P42695 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC29.96■■■□□ 2.39
NCAPD3P42695 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC29.96■■■□□ 2.39
NCAPD3P42695 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
NCAPD3P42695 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms