Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.63■□□□□ 0.73
CNGA1P29973 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.63■□□□□ 0.73
CNGA1P29973 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.63■□□□□ 0.73
CNGA1P29973 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.63■□□□□ 0.73
CNGA1P29973 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CNGA1P29973 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 AC244107.1-201ENST00000442033 332 ntBASIC19.63■□□□□ 0.73
CNGA1P29973 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.63■□□□□ 0.73
CNGA1P29973 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.63■□□□□ 0.73
CNGA1P29973 CXCL1P1-201ENST00000502804 216 ntBASIC19.63■□□□□ 0.73
CNGA1P29973 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.63■□□□□ 0.73
CNGA1P29973 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CNGA1P29973 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
CNGA1P29973 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNGA1P29973 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CNGA1P29973 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.62■□□□□ 0.73
CNGA1P29973 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.62■□□□□ 0.73
CNGA1P29973 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.62■□□□□ 0.73
CNGA1P29973 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNGA1P29973 AC009336.1-201ENST00000608941 1553 ntBASIC19.62■□□□□ 0.73
CNGA1P29973 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNGA1P29973 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.62■□□□□ 0.73
CNGA1P29973 KRT18P55-202ENST00000578578 1546 ntBASIC19.62■□□□□ 0.73
CNGA1P29973 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.62■□□□□ 0.73
CNGA1P29973 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNGA1P29973 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNGA1P29973 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNGA1P29973 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.62■□□□□ 0.73
CNGA1P29973 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNGA1P29973 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.62■□□□□ 0.73
CNGA1P29973 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.62■□□□□ 0.73
CNGA1P29973 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.62■□□□□ 0.73
CNGA1P29973 AC068137.2-201ENST00000605408 478 ntBASIC19.62■□□□□ 0.73
CNGA1P29973 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.62■□□□□ 0.73
CNGA1P29973 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNGA1P29973 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CNGA1P29973 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNGA1P29973 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.62■□□□□ 0.73
CNGA1P29973 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNGA1P29973 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 BX276092.7-203ENST00000637198 1536 ntBASIC19.61■□□□□ 0.73
CNGA1P29973 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNGA1P29973 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.61■□□□□ 0.73
CNGA1P29973 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.61■□□□□ 0.73
CNGA1P29973 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.61■□□□□ 0.73
CNGA1P29973 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.61■□□□□ 0.73
CNGA1P29973 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.61■□□□□ 0.73
CNGA1P29973 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNGA1P29973 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNGA1P29973 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CNGA1P29973 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CNGA1P29973 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 AC009949.1-201ENST00000623048 1830 ntBASIC19.6■□□□□ 0.73
CNGA1P29973 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.6■□□□□ 0.73
CNGA1P29973 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNGA1P29973 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms