Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COL8A2P25067 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 LINC00304-203ENST00000565008 1864 ntBASIC14.59□□□□□ -0.07
COL8A2P25067 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 AL355312.1-201ENST00000407115 2176 ntBASIC14.59□□□□□ -0.07
COL8A2P25067 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.59□□□□□ -0.07
COL8A2P25067 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 CRYGEP-201ENST00000412192 528 ntBASIC14.59□□□□□ -0.07
COL8A2P25067 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 RNA5SP416-201ENST00000516838 111 ntBASIC14.59□□□□□ -0.07
COL8A2P25067 IGHV3-65-201ENST00000523210 341 ntBASIC14.59□□□□□ -0.07
COL8A2P25067 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.59□□□□□ -0.07
COL8A2P25067 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 AC008667.4-201ENST00000607370 168 ntBASIC14.59□□□□□ -0.07
COL8A2P25067 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
COL8A2P25067 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.59□□□□□ -0.07
COL8A2P25067 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.59□□□□□ -0.07
COL8A2P25067 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL8A2P25067 LINC00896-202ENST00000609602 2128 ntBASIC14.59□□□□□ -0.07
COL8A2P25067 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
COL8A2P25067 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
COL8A2P25067 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COL8A2P25067 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COL8A2P25067 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COL8A2P25067 GPR89P-201ENST00000407924 1495 ntBASIC14.58□□□□□ -0.08
COL8A2P25067 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.58□□□□□ -0.08
COL8A2P25067 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.58□□□□□ -0.08
COL8A2P25067 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.58□□□□□ -0.08
COL8A2P25067 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
COL8A2P25067 KRT18P2-201ENST00000447938 1258 ntBASIC14.58□□□□□ -0.08
COL8A2P25067 AC108073.2-201ENST00000464002 357 ntBASIC14.58□□□□□ -0.08
COL8A2P25067 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.58□□□□□ -0.08
COL8A2P25067 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.58□□□□□ -0.08
COL8A2P25067 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.58□□□□□ -0.08
COL8A2P25067 AC064836.3-201ENST00000607928 673 ntBASIC14.58□□□□□ -0.08
COL8A2P25067 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
COL8A2P25067 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
COL8A2P25067 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL8A2P25067 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
COL8A2P25067 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
COL8A2P25067 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.58□□□□□ -0.08
COL8A2P25067 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms