Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.2□□□□□ -0.3
NTF3P20783 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NTF3P20783 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.2□□□□□ -0.3
NTF3P20783 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.2□□□□□ -0.3
NTF3P20783 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.2□□□□□ -0.3
NTF3P20783 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.2□□□□□ -0.3
NTF3P20783 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NTF3P20783 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.2□□□□□ -0.3
NTF3P20783 AL353708.3-201ENST00000610272 989 ntBASIC13.2□□□□□ -0.3
NTF3P20783 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NTF3P20783 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NTF3P20783 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 KRT16P1-201ENST00000399124 1418 ntBASIC13.2□□□□□ -0.3
NTF3P20783 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
NTF3P20783 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.2□□□□□ -0.3
NTF3P20783 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NTF3P20783 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.2□□□□□ -0.3
NTF3P20783 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.2□□□□□ -0.3
NTF3P20783 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.2□□□□□ -0.3
NTF3P20783 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NTF3P20783 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.19□□□□□ -0.3
NTF3P20783 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NTF3P20783 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NTF3P20783 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NTF3P20783 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.19□□□□□ -0.3
NTF3P20783 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.19□□□□□ -0.3
NTF3P20783 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.19□□□□□ -0.3
NTF3P20783 AP003097.1-201ENST00000530657 1135 ntBASIC13.19□□□□□ -0.3
NTF3P20783 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.19□□□□□ -0.3
NTF3P20783 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
NTF3P20783 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.19□□□□□ -0.3
NTF3P20783 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NTF3P20783 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NTF3P20783 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NTF3P20783 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NTF3P20783 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NTF3P20783 AC022188.1-201ENST00000620960 1664 ntBASIC13.18□□□□□ -0.3
NTF3P20783 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NTF3P20783 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NTF3P20783 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NTF3P20783 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
NTF3P20783 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NTF3P20783 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
NTF3P20783 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
NTF3P20783 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NTF3P20783 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NTF3P20783 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.18□□□□□ -0.3
NTF3P20783 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NTF3P20783 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms