Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 TERF1P1-201ENST00000311003 1181 ntBASIC15.2■□□□□ 0.02
ATF1P18846 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 MIR662-201ENST00000384847 95 ntBASIC15.2■□□□□ 0.02
ATF1P18846 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 MTCL1P1-201ENST00000446207 792 ntBASIC15.2■□□□□ 0.02
ATF1P18846 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.2■□□□□ 0.02
ATF1P18846 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.2■□□□□ 0.02
ATF1P18846 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.2■□□□□ 0.02
ATF1P18846 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.2■□□□□ 0.02
ATF1P18846 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.2■□□□□ 0.02
ATF1P18846 AL139327.4-201ENST00000612362 153 ntBASIC15.2■□□□□ 0.02
ATF1P18846 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.2■□□□□ 0.02
ATF1P18846 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.2■□□□□ 0.02
ATF1P18846 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.2■□□□□ 0.02
ATF1P18846 AC093525.9-201ENST00000624961 1746 ntBASIC15.2■□□□□ 0.02
ATF1P18846 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATF1P18846 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.19■□□□□ 0.02
ATF1P18846 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 CYP2T1P-202ENST00000641596 2535 ntBASIC15.19■□□□□ 0.02
ATF1P18846 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.19■□□□□ 0.02
ATF1P18846 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ATF1P18846 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.19■□□□□ 0.02
ATF1P18846 AC117947.1-201ENST00000427448 529 ntBASIC15.19■□□□□ 0.02
ATF1P18846 AC068472.1-201ENST00000474589 881 ntBASIC15.19■□□□□ 0.02
ATF1P18846 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.19■□□□□ 0.02
ATF1P18846 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.19■□□□□ 0.02
ATF1P18846 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.19■□□□□ 0.02
ATF1P18846 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.19■□□□□ 0.02
ATF1P18846 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 GPR32P1-201ENST00000601788 811 ntBASIC15.19■□□□□ 0.02
ATF1P18846 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.19■□□□□ 0.02
ATF1P18846 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ATF1P18846 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
ATF1P18846 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ATF1P18846 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.19■□□□□ 0.02
ATF1P18846 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ATF1P18846 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.18■□□□□ 0.02
ATF1P18846 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.18■□□□□ 0.02
ATF1P18846 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.18■□□□□ 0.02
ATF1P18846 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ATF1P18846 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
ATF1P18846 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ATF1P18846 AC132872.4-202ENST00000622924 2756 ntBASIC15.18■□□□□ 0.02
ATF1P18846 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.18■□□□□ 0.02
ATF1P18846 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATF1P18846 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms