Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CFTRP13569 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CFTRP13569 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.25
CFTRP13569 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CFTRP13569 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC29.14■■■□□ 2.25
CFTRP13569 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CFTRP13569 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CFTRP13569 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CFTRP13569 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC29.13■■■□□ 2.25
CFTRP13569 SLC25A1P3-201ENST00000395415 828 ntBASIC29.13■■■□□ 2.25
CFTRP13569 DGCR5-201ENST00000399539 862 ntBASIC29.13■■■□□ 2.25
CFTRP13569 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC29.13■■■□□ 2.25
CFTRP13569 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CFTRP13569 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC29.13■■■□□ 2.25
CFTRP13569 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
CFTRP13569 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC29.13■■■□□ 2.25
CFTRP13569 AC003101.2-201ENST00000612557 442 ntBASIC29.13■■■□□ 2.25
CFTRP13569 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CFTRP13569 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC29.13■■■□□ 2.25
CFTRP13569 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CFTRP13569 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CFTRP13569 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CFTRP13569 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CFTRP13569 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CFTRP13569 FAM220BP-201ENST00000377689 816 ntBASIC29.12■■■□□ 2.25
CFTRP13569 HLA-H-201ENST00000383620 1096 ntBASIC29.12■■■□□ 2.25
CFTRP13569 RPL37AP1-201ENST00000412502 279 ntBASIC29.12■■■□□ 2.25
CFTRP13569 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC29.12■■■□□ 2.25
CFTRP13569 RPS2P32-201ENST00000439199 892 ntBASIC29.12■■■□□ 2.25
CFTRP13569 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC29.12■■■□□ 2.25
CFTRP13569 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC29.12■■■□□ 2.25
CFTRP13569 AC017083.2-201ENST00000608069 979 ntBASIC29.12■■■□□ 2.25
CFTRP13569 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC29.12■■■□□ 2.25
CFTRP13569 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC29.12■■■□□ 2.25
CFTRP13569 HARS-204ENST00000438307 1789 ntTSL 2 BASIC29.12■■■□□ 2.25
CFTRP13569 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
CFTRP13569 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
CFTRP13569 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
CFTRP13569 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CFTRP13569 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CFTRP13569 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC29.12■■■□□ 2.25
CFTRP13569 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
CFTRP13569 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
CFTRP13569 DFFBP1-201ENST00000433250 979 ntBASIC29.11■■■□□ 2.25
CFTRP13569 MIR6799-201ENST00000620297 69 ntBASIC29.11■■■□□ 2.25
CFTRP13569 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC29.11■■■□□ 2.25
CFTRP13569 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
CFTRP13569 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CFTRP13569 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
CFTRP13569 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CFTRP13569 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC29.11■■■□□ 2.25
CFTRP13569 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC29.11■■■□□ 2.25
CFTRP13569 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CFTRP13569 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CFTRP13569 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CFTRP13569 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CFTRP13569 USP49-202ENST00000373010 2446 ntTSL 5 BASIC29.11■■■□□ 2.25
CFTRP13569 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CFTRP13569 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CFTRP13569 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CFTRP13569 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC29.1■■■□□ 2.25
CFTRP13569 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC29.1■■■□□ 2.25
CFTRP13569 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CFTRP13569 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC29.1■■■□□ 2.25
CFTRP13569 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
CFTRP13569 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CFTRP13569 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC29.1■■■□□ 2.25
CFTRP13569 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
CFTRP13569 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CFTRP13569 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
CFTRP13569 AL512384.1-201ENST00000406683 331 ntBASIC29.1■■■□□ 2.25
CFTRP13569 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC29.1■■■□□ 2.25
CFTRP13569 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC29.1■■■□□ 2.25
CFTRP13569 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC29.1■■■□□ 2.25
CFTRP13569 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CFTRP13569 AC104794.3-201ENST00000566840 1248 ntBASIC29.1■■■□□ 2.25
CFTRP13569 AL133215.2-201ENST00000609242 977 ntBASIC29.1■■■□□ 2.25
CFTRP13569 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC29.1■■■□□ 2.25
CFTRP13569 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CFTRP13569 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CFTRP13569 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
CFTRP13569 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC29.09■■■□□ 2.25
CFTRP13569 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CFTRP13569 AC007541.1-201ENST00000570282 1469 ntBASIC29.09■■■□□ 2.25
CFTRP13569 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC29.09■■■□□ 2.25
CFTRP13569 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC29.09■■■□□ 2.25
CFTRP13569 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CFTRP13569 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC29.09■■■□□ 2.25
CFTRP13569 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
CFTRP13569 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC29.08■■■□□ 2.25
CFTRP13569 MADD-208ENST00000405573 1823 ntTSL 5 BASIC29.08■■■□□ 2.25
CFTRP13569 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC29.08■■■□□ 2.25
CFTRP13569 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CFTRP13569 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC29.08■■■□□ 2.25
CFTRP13569 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
CFTRP13569 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC29.08■■■□□ 2.25
CFTRP13569 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC29.08■■■□□ 2.25
CFTRP13569 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
CFTRP13569 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC29.08■■■□□ 2.25
CFTRP13569 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms