Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
LAMP1P11279 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 AC003669.1-201ENST00000334569 611 ntBASIC16.38■□□□□ 0.21
LAMP1P11279 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.38■□□□□ 0.21
LAMP1P11279 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.38■□□□□ 0.21
LAMP1P11279 TOB2P1-201ENST00000469761 992 ntBASIC16.38■□□□□ 0.21
LAMP1P11279 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.38■□□□□ 0.21
LAMP1P11279 AC087388.1-201ENST00000571370 1112 ntBASIC16.38■□□□□ 0.21
LAMP1P11279 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LAMP1P11279 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LAMP1P11279 AP002414.4-201ENST00000589764 1148 ntBASIC16.38■□□□□ 0.21
LAMP1P11279 Z69720.1-201ENST00000601483 472 ntBASIC16.38■□□□□ 0.21
LAMP1P11279 AC073592.5-201ENST00000624854 528 ntBASIC16.38■□□□□ 0.21
LAMP1P11279 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.38■□□□□ 0.21
LAMP1P11279 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LAMP1P11279 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
LAMP1P11279 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.37■□□□□ 0.21
LAMP1P11279 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.37■□□□□ 0.21
LAMP1P11279 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.37■□□□□ 0.21
LAMP1P11279 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 OR6D1P-203ENST00000641209 4860 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.37■□□□□ 0.21
LAMP1P11279 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LAMP1P11279 KLF4P1-201ENST00000412782 1185 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 KRT17P6-201ENST00000453795 1220 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 MINOS1P3-201ENST00000457048 203 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.37■□□□□ 0.21
LAMP1P11279 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.37■□□□□ 0.21
LAMP1P11279 AC124947.2-201ENST00000547118 1133 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.37■□□□□ 0.21
LAMP1P11279 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.37■□□□□ 0.21
LAMP1P11279 BNIP3P18-201ENST00000593976 575 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
LAMP1P11279 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LAMP1P11279 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LAMP1P11279 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.37■□□□□ 0.21
LAMP1P11279 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LAMP1P11279 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.37■□□□□ 0.21
LAMP1P11279 IER3-202ENST00000376377 1350 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 INTS4P1-201ENST00000438455 1935 ntBASIC16.37■□□□□ 0.21
LAMP1P11279 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.37■□□□□ 0.21
LAMP1P11279 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LAMP1P11279 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LAMP1P11279 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.36■□□□□ 0.21
LAMP1P11279 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LAMP1P11279 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.36■□□□□ 0.21
LAMP1P11279 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LAMP1P11279 NSUN5P1-202ENST00000421140 1535 ntBASIC16.36■□□□□ 0.21
LAMP1P11279 NSUN5P2-203ENST00000457352 1529 ntBASIC16.36■□□□□ 0.21
LAMP1P11279 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
LAMP1P11279 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.36■□□□□ 0.21
LAMP1P11279 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.36■□□□□ 0.21
LAMP1P11279 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LAMP1P11279 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.36■□□□□ 0.21
LAMP1P11279 RCN1P2-201ENST00000398357 915 ntBASIC16.36■□□□□ 0.21
LAMP1P11279 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.36■□□□□ 0.21
LAMP1P11279 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.36■□□□□ 0.21
LAMP1P11279 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.36■□□□□ 0.21
LAMP1P11279 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.36■□□□□ 0.21
LAMP1P11279 AL590326.2-201ENST00000625139 305 ntBASIC16.36■□□□□ 0.21
LAMP1P11279 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms