Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CSB-PGBD3P0DP91 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 MIR661-201ENST00000384842 89 ntBASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 GSAP-205ENST00000430584 600 ntTSL 5 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 AC026150.2-201ENST00000564693 1156 ntBASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 AC012645.4-201ENST00000610691 1061 ntBASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 AC008677.1-201ENST00000519230 1561 ntBASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 AC063926.2-201ENST00000623766 1308 ntBASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CSB-PGBD3P0DP91 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 SLC25A39P2-201ENST00000537614 270 ntBASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 AC140878.1-201ENST00000565277 250 ntBASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.73■■□□□ 1.23
CSB-PGBD3P0DP91 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CSB-PGBD3P0DP91 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSB-PGBD3P0DP91 HNRNPRP1-201ENST00000453465 1695 ntBASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms