Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.91■□□□□ 0.62
CLTAP09496 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.91■□□□□ 0.62
CLTAP09496 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.91■□□□□ 0.62
CLTAP09496 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.91■□□□□ 0.62
CLTAP09496 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.91■□□□□ 0.62
CLTAP09496 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.91■□□□□ 0.62
CLTAP09496 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CLTAP09496 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
CLTAP09496 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.91■□□□□ 0.62
CLTAP09496 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.91■□□□□ 0.62
CLTAP09496 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
CLTAP09496 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.91■□□□□ 0.62
CLTAP09496 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CLTAP09496 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 NCF1C-201ENST00000438382 1427 ntBASIC18.91■□□□□ 0.62
CLTAP09496 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLTAP09496 PCDHA12-202ENST00000613593 2588 ntBASIC18.9■□□□□ 0.62
CLTAP09496 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
CLTAP09496 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.9■□□□□ 0.62
CLTAP09496 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.9■□□□□ 0.62
CLTAP09496 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.9■□□□□ 0.62
CLTAP09496 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 LYSMD4-203ENST00000378904 2122 ntBASIC18.9■□□□□ 0.62
CLTAP09496 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.9■□□□□ 0.62
CLTAP09496 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.9■□□□□ 0.62
CLTAP09496 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.9■□□□□ 0.62
CLTAP09496 AC105339.3-201ENST00000560043 636 ntBASIC18.9■□□□□ 0.62
CLTAP09496 AC012640.2-201ENST00000561606 901 ntBASIC18.9■□□□□ 0.62
CLTAP09496 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.9■□□□□ 0.62
CLTAP09496 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.9■□□□□ 0.62
CLTAP09496 AC006557.2-201ENST00000592985 1240 ntBASIC18.9■□□□□ 0.62
CLTAP09496 BX640515.1-201ENST00000617215 977 ntBASIC18.9■□□□□ 0.62
CLTAP09496 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.9■□□□□ 0.62
CLTAP09496 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.9■□□□□ 0.62
CLTAP09496 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 AC243591.1-201ENST00000452967 1364 ntBASIC18.9■□□□□ 0.62
CLTAP09496 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CLTAP09496 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLTAP09496 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
CLTAP09496 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.89■□□□□ 0.62
CLTAP09496 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.89■□□□□ 0.61
CLTAP09496 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CLTAP09496 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.89■□□□□ 0.61
CLTAP09496 AL590627.1-203ENST00000421194 1026 ntBASIC18.89■□□□□ 0.61
CLTAP09496 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.89■□□□□ 0.61
CLTAP09496 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.89■□□□□ 0.61
CLTAP09496 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.89■□□□□ 0.61
CLTAP09496 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.89■□□□□ 0.61
CLTAP09496 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.89■□□□□ 0.61
CLTAP09496 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.89■□□□□ 0.61
CLTAP09496 AC116407.3-201ENST00000623905 1129 ntBASIC18.89■□□□□ 0.61
CLTAP09496 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CLTAP09496 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 AC097637.2-201ENST00000624096 1997 ntBASIC18.89■□□□□ 0.61
CLTAP09496 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 AL138688.1-201ENST00000624851 1594 ntBASIC18.89■□□□□ 0.61
CLTAP09496 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLTAP09496 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLTAP09496 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLTAP09496 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.88■□□□□ 0.61
CLTAP09496 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.88■□□□□ 0.61
CLTAP09496 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.88■□□□□ 0.61
CLTAP09496 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.88■□□□□ 0.61
CLTAP09496 KRT18P27-201ENST00000427733 1299 ntBASIC18.88■□□□□ 0.61
CLTAP09496 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.88■□□□□ 0.61
CLTAP09496 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.88■□□□□ 0.61
CLTAP09496 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms