Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM1P09493 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.08■□□□□ 0.65
TPM1P09493 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.08■□□□□ 0.65
TPM1P09493 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM1P09493 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM1P09493 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.08■□□□□ 0.65
TPM1P09493 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.08■□□□□ 0.65
TPM1P09493 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.08■□□□□ 0.64
TPM1P09493 AP006294.2-201ENST00000641667 209 ntBASIC19.08■□□□□ 0.64
TPM1P09493 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.08■□□□□ 0.64
TPM1P09493 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TPM1P09493 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM1P09493 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
TPM1P09493 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM1P09493 AC093525.9-201ENST00000624961 1746 ntBASIC19.08■□□□□ 0.64
TPM1P09493 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TPM1P09493 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM1P09493 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM1P09493 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM1P09493 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM1P09493 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM1P09493 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 RASA4DP-201ENST00000460726 1199 ntBASIC19.07■□□□□ 0.64
TPM1P09493 AC141257.4-201ENST00000634557 245 ntBASIC19.07■□□□□ 0.64
TPM1P09493 AC136944.6-201ENST00000634818 245 ntBASIC19.07■□□□□ 0.64
TPM1P09493 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
TPM1P09493 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM1P09493 KRT8P9-201ENST00000558927 1449 ntBASIC19.07■□□□□ 0.64
TPM1P09493 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TPM1P09493 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM1P09493 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
TPM1P09493 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM1P09493 AL596257.1-201ENST00000641463 2694 ntBASIC19.07■□□□□ 0.64
TPM1P09493 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM1P09493 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 MYCLP1-201ENST00000372451 1075 ntBASIC19.06■□□□□ 0.64
TPM1P09493 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.06■□□□□ 0.64
TPM1P09493 FAM8A6P-201ENST00000407496 1135 ntBASIC19.06■□□□□ 0.64
TPM1P09493 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.06■□□□□ 0.64
TPM1P09493 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.06■□□□□ 0.64
TPM1P09493 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.06■□□□□ 0.64
TPM1P09493 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.06■□□□□ 0.64
TPM1P09493 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 AC046185.3-201ENST00000623228 1824 ntBASIC19.06■□□□□ 0.64
TPM1P09493 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.06■□□□□ 0.64
TPM1P09493 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM1P09493 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM1P09493 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms