Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SFTPBP07988 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.06■□□□□ 0
SFTPBP07988 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 HCG4P8-203ENST00000443049 980 ntBASIC15.06■□□□□ 0
SFTPBP07988 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.06■□□□□ 0
SFTPBP07988 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.06■□□□□ 0
SFTPBP07988 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.06■□□□□ 0
SFTPBP07988 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.06■□□□□ 0
SFTPBP07988 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.06■□□□□ 0
SFTPBP07988 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.06■□□□□ 0
SFTPBP07988 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.06■□□□□ 0
SFTPBP07988 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.06■□□□□ 0
SFTPBP07988 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 AL353692.3-201ENST00000407031 1396 ntBASIC15.06■□□□□ 0
SFTPBP07988 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.06■□□□□ 0
SFTPBP07988 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SFTPBP07988 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SFTPBP07988 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SFTPBP07988 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.06■□□□□ 0
SFTPBP07988 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SFTPBP07988 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
SFTPBP07988 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SFTPBP07988 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SFTPBP07988 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SFTPBP07988 AL118508.1-201ENST00000613502 2345 ntBASIC15.05■□□□□ 0
SFTPBP07988 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.05■□□□□ 0
SFTPBP07988 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SFTPBP07988 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SFTPBP07988 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.05■□□□□ -0
SFTPBP07988 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.05■□□□□ -0
SFTPBP07988 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SFTPBP07988 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SFTPBP07988 BX276092.5-203ENST00000456199 560 ntBASIC15.05■□□□□ -0
SFTPBP07988 KRT18P56-201ENST00000507275 550 ntBASIC15.05■□□□□ -0
SFTPBP07988 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.05■□□□□ -0
SFTPBP07988 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.05■□□□□ -0
SFTPBP07988 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SFTPBP07988 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.05■□□□□ -0
SFTPBP07988 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.05■□□□□ -0
SFTPBP07988 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.05■□□□□ -0
SFTPBP07988 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SFTPBP07988 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.05■□□□□ -0
SFTPBP07988 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.05■□□□□ -0
SFTPBP07988 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SFTPBP07988 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SFTPBP07988 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SFTPBP07988 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SFTPBP07988 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.04■□□□□ -0
SFTPBP07988 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.04■□□□□ -0
SFTPBP07988 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SFTPBP07988 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.04■□□□□ -0
SFTPBP07988 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.04■□□□□ -0
SFTPBP07988 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SFTPBP07988 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SFTPBP07988 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.04■□□□□ -0
SFTPBP07988 Z83836.1-201ENST00000624605 1642 ntBASIC15.04■□□□□ -0
SFTPBP07988 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SFTPBP07988 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SFTPBP07988 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms