Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSBP07858 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CTSBP07858 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSBP07858 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSBP07858 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.3■□□□□ 0.2
CTSBP07858 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTSBP07858 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTSBP07858 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTSBP07858 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CTSBP07858 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSBP07858 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CTSBP07858 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.3■□□□□ 0.2
CTSBP07858 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSBP07858 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.3■□□□□ 0.2
CTSBP07858 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CTSBP07858 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSBP07858 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSBP07858 GGTLC5P-201ENST00000617623 998 ntBASIC16.3■□□□□ 0.2
CTSBP07858 AC139530.3-201ENST00000620344 690 ntBASIC16.3■□□□□ 0.2
CTSBP07858 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.3■□□□□ 0.2
CTSBP07858 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.3■□□□□ 0.2
CTSBP07858 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CTSBP07858 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSBP07858 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CTSBP07858 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CTSBP07858 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 AC040169.1-201ENST00000565382 521 ntBASIC16.29■□□□□ 0.2
CTSBP07858 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.29■□□□□ 0.2
CTSBP07858 AC004877.2-201ENST00000623941 599 ntBASIC16.29■□□□□ 0.2
CTSBP07858 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSBP07858 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSBP07858 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSBP07858 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 AC002310.6-201ENST00000624451 1377 ntBASIC16.28■□□□□ 0.2
CTSBP07858 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTSBP07858 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSBP07858 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTSBP07858 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 AC092053.1-201ENST00000605787 1936 ntBASIC16.28■□□□□ 0.2
CTSBP07858 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.28■□□□□ 0.2
CTSBP07858 AC112482.1-201ENST00000492080 688 ntBASIC16.28■□□□□ 0.2
CTSBP07858 ACTL9-202ENST00000612068 1252 ntBASIC16.28■□□□□ 0.2
CTSBP07858 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 EGFEM1P-202ENST00000431685 1563 ntBASIC16.28■□□□□ 0.2
CTSBP07858 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSBP07858 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTSBP07858 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSBP07858 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.28■□□□□ 0.2
CTSBP07858 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms