Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC22.43■■□□□ 1.18
COL5A2P05997 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
COL5A2P05997 LINC00895-201ENST00000629028 1637 ntBASIC22.43■■□□□ 1.18
COL5A2P05997 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.43■■□□□ 1.18
COL5A2P05997 TOP3BP1-201ENST00000420768 1380 ntBASIC22.43■■□□□ 1.18
COL5A2P05997 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC22.43■■□□□ 1.18
COL5A2P05997 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.43■■□□□ 1.18
COL5A2P05997 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC22.42■■□□□ 1.18
COL5A2P05997 HLA-V-204ENST00000476601 1289 ntBASIC22.42■■□□□ 1.18
COL5A2P05997 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.42■■□□□ 1.18
COL5A2P05997 AC010336.2-201ENST00000564226 506 ntBASIC22.42■■□□□ 1.18
COL5A2P05997 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 AL844908.2-201ENST00000609461 460 ntBASIC22.42■■□□□ 1.18
COL5A2P05997 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.42■■□□□ 1.18
COL5A2P05997 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL5A2P05997 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
COL5A2P05997 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.41■■□□□ 1.18
COL5A2P05997 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC22.41■■□□□ 1.18
COL5A2P05997 REEP4-207ENST00000523293 913 ntTSL 3 BASIC22.41■■□□□ 1.18
COL5A2P05997 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC22.41■■□□□ 1.18
COL5A2P05997 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC22.41■■□□□ 1.18
COL5A2P05997 AL132655.2-201ENST00000596276 594 ntBASIC22.41■■□□□ 1.18
COL5A2P05997 AC008738.7-201ENST00000609744 511 ntBASIC22.41■■□□□ 1.18
COL5A2P05997 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
COL5A2P05997 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
COL5A2P05997 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL5A2P05997 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.41■■□□□ 1.18
COL5A2P05997 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.41■■□□□ 1.18
COL5A2P05997 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.41■■□□□ 1.18
COL5A2P05997 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.41■■□□□ 1.18
COL5A2P05997 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 AP3S2-216ENST00000617003 1561 ntBASIC22.41■■□□□ 1.18
COL5A2P05997 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC22.41■■□□□ 1.18
COL5A2P05997 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.41■■□□□ 1.18
COL5A2P05997 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.41■■□□□ 1.18
COL5A2P05997 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL5A2P05997 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL5A2P05997 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.41■■□□□ 1.18
COL5A2P05997 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
COL5A2P05997 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.4■■□□□ 1.18
COL5A2P05997 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
COL5A2P05997 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
COL5A2P05997 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.4■■□□□ 1.18
COL5A2P05997 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 KRT17P7-201ENST00000451704 1104 ntBASIC22.4■■□□□ 1.18
COL5A2P05997 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.4■■□□□ 1.18
COL5A2P05997 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.4■■□□□ 1.18
COL5A2P05997 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC22.4■■□□□ 1.18
COL5A2P05997 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC22.4■■□□□ 1.18
COL5A2P05997 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
COL5A2P05997 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
COL5A2P05997 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL5A2P05997 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
COL5A2P05997 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL5A2P05997 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL5A2P05997 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 SLC25A1P3-201ENST00000395415 828 ntBASIC22.39■■□□□ 1.17
COL5A2P05997 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL5A2P05997 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC22.39■■□□□ 1.17
COL5A2P05997 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC22.39■■□□□ 1.17
COL5A2P05997 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms