Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TUBB4AP04350 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TUBB4AP04350 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBB4AP04350 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.54■□□□□ 0.56
TUBB4AP04350 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TUBB4AP04350 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBB4AP04350 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TUBB4AP04350 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TUBB4AP04350 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBB4AP04350 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBB4AP04350 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBB4AP04350 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBB4AP04350 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBB4AP04350 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TUBB4AP04350 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBB4AP04350 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBB4AP04350 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBB4AP04350 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TUBB4AP04350 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.53■□□□□ 0.56
TUBB4AP04350 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.53■□□□□ 0.56
TUBB4AP04350 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.53■□□□□ 0.56
TUBB4AP04350 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.53■□□□□ 0.56
TUBB4AP04350 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBB4AP04350 AC009154.2-201ENST00000621177 724 ntBASIC18.53■□□□□ 0.56
TUBB4AP04350 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TUBB4AP04350 AC066615.1-201ENST00000640911 628 ntBASIC18.53■□□□□ 0.56
TUBB4AP04350 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 ME2P1-201ENST00000426028 1970 ntBASIC18.53■□□□□ 0.56
TUBB4AP04350 AC092850.2-201ENST00000623821 2697 ntBASIC18.53■□□□□ 0.56
TUBB4AP04350 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBB4AP04350 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBB4AP04350 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBB4AP04350 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TUBB4AP04350 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.52■□□□□ 0.56
TUBB4AP04350 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBB4AP04350 AC112698.1-201ENST00000510299 916 ntBASIC18.52■□□□□ 0.56
TUBB4AP04350 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TUBB4AP04350 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TUBB4AP04350 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.52■□□□□ 0.56
TUBB4AP04350 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.52■□□□□ 0.56
TUBB4AP04350 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBB4AP04350 PAUPAR-201ENST00000630360 2965 ntBASIC18.52■□□□□ 0.56
TUBB4AP04350 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TUBB4AP04350 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.52■□□□□ 0.55
TUBB4AP04350 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBB4AP04350 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBB4AP04350 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.52■□□□□ 0.55
TUBB4AP04350 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TUBB4AP04350 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBB4AP04350 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TUBB4AP04350 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TUBB4AP04350 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.52■□□□□ 0.55
TUBB4AP04350 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TUBB4AP04350 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBB4AP04350 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TUBB4AP04350 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TUBB4AP04350 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TUBB4AP04350 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.51■□□□□ 0.55
TUBB4AP04350 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBB4AP04350 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBB4AP04350 AC098590.1-201ENST00000468126 897 ntBASIC18.51■□□□□ 0.55
TUBB4AP04350 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TUBB4AP04350 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TUBB4AP04350 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBB4AP04350 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBB4AP04350 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBB4AP04350 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms