Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PDGFAP04085 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.18■□□□□ 0.18
PDGFAP04085 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.18■□□□□ 0.18
PDGFAP04085 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFAP04085 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.18■□□□□ 0.18
PDGFAP04085 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 MIR4751-201ENST00000578027 74 ntBASIC16.18■□□□□ 0.18
PDGFAP04085 AL078644.1-201ENST00000609881 752 ntBASIC16.18■□□□□ 0.18
PDGFAP04085 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDGFAP04085 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFAP04085 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFAP04085 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFAP04085 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFAP04085 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PDGFAP04085 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFAP04085 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 CICP6-201ENST00000457191 2729 ntBASIC16.17■□□□□ 0.18
PDGFAP04085 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDGFAP04085 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFAP04085 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 AC254562.1-201ENST00000417586 456 ntBASIC16.17■□□□□ 0.18
PDGFAP04085 VN2R19P-201ENST00000442399 1052 ntBASIC16.17■□□□□ 0.18
PDGFAP04085 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFAP04085 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 HCG4B-203ENST00000450128 991 ntBASIC16.17■□□□□ 0.18
PDGFAP04085 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFAP04085 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFAP04085 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFAP04085 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFAP04085 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PDGFAP04085 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFAP04085 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDGFAP04085 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFAP04085 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFAP04085 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFAP04085 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PDGFAP04085 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFAP04085 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFAP04085 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.16■□□□□ 0.18
PDGFAP04085 AL020989.1-201ENST00000422979 469 ntBASIC16.16■□□□□ 0.18
PDGFAP04085 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.16■□□□□ 0.18
PDGFAP04085 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.16■□□□□ 0.18
PDGFAP04085 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDGFAP04085 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFAP04085 C20orf181-201ENST00000623918 480 ntBASIC16.16■□□□□ 0.18
PDGFAP04085 AC079416.2-201ENST00000625035 1193 ntBASIC16.16■□□□□ 0.18
PDGFAP04085 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDGFAP04085 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 AC132938.5-201ENST00000624980 1813 ntBASIC16.16■□□□□ 0.18
PDGFAP04085 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFAP04085 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms