Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 HLA-F-220ENST00000434407 884 ntBASIC17.64■□□□□ 0.41
MT-ND3P03897 TPM4P1-201ENST00000436100 807 ntBASIC17.64■□□□□ 0.41
MT-ND3P03897 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 TSSC2-201ENST00000450217 709 ntBASIC17.64■□□□□ 0.41
MT-ND3P03897 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-ND3P03897 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-ND3P03897 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.64■□□□□ 0.41
MT-ND3P03897 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.64■□□□□ 0.41
MT-ND3P03897 AC092329.2-201ENST00000598402 547 ntBASIC17.64■□□□□ 0.41
MT-ND3P03897 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
MT-ND3P03897 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-ND3P03897 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-ND3P03897 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MT-ND3P03897 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MT-ND3P03897 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-ND3P03897 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-ND3P03897 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MT-ND3P03897 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-ND3P03897 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.63■□□□□ 0.41
MT-ND3P03897 KRT8P26-201ENST00000534154 1276 ntBASIC17.63■□□□□ 0.41
MT-ND3P03897 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-ND3P03897 NPAP1P7-201ENST00000613027 823 ntBASIC17.63■□□□□ 0.41
MT-ND3P03897 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MT-ND3P03897 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 AC005915.1-201ENST00000624912 2018 ntBASIC17.63■□□□□ 0.41
MT-ND3P03897 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 FLJ38576-201ENST00000623820 2459 ntBASIC17.63■□□□□ 0.41
MT-ND3P03897 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MT-ND3P03897 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MT-ND3P03897 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.63■□□□□ 0.41
MT-ND3P03897 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MT-ND3P03897 KRT89P-201ENST00000620027 1478 ntBASIC17.63■□□□□ 0.41
MT-ND3P03897 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-ND3P03897 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MT-ND3P03897 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
MT-ND3P03897 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.62■□□□□ 0.41
MT-ND3P03897 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-ND3P03897 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MT-ND3P03897 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.62■□□□□ 0.41
MT-ND3P03897 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.62■□□□□ 0.41
MT-ND3P03897 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.62■□□□□ 0.41
MT-ND3P03897 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.62■□□□□ 0.41
MT-ND3P03897 MIR3652-201ENST00000579335 131 ntBASIC17.62■□□□□ 0.41
MT-ND3P03897 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-ND3P03897 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 AL391807.1-203ENST00000604392 2365 ntBASIC17.62■□□□□ 0.41
MT-ND3P03897 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MT-ND3P03897 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MT-ND3P03897 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MT-ND3P03897 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.62■□□□□ 0.41
MT-ND3P03897 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-ND3P03897 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-ND3P03897 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MT-ND3P03897 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND3P03897 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms