Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.03□□□□□ -0.32
LTAP01374 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LTAP01374 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.03□□□□□ -0.32
LTAP01374 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LTAP01374 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.03□□□□□ -0.32
LTAP01374 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.03□□□□□ -0.32
LTAP01374 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.03□□□□□ -0.32
LTAP01374 EGLN1P1-201ENST00000531623 762 ntBASIC13.03□□□□□ -0.32
LTAP01374 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.03□□□□□ -0.32
LTAP01374 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.03□□□□□ -0.32
LTAP01374 AP000525.1-201ENST00000608286 694 ntBASIC13.03□□□□□ -0.32
LTAP01374 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.03□□□□□ -0.32
LTAP01374 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
LTAP01374 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
LTAP01374 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 HLA-A-202ENST00000376806 1854 ntBASIC13.03□□□□□ -0.32
LTAP01374 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.03□□□□□ -0.32
LTAP01374 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 AC103702.1-201ENST00000548801 2630 ntBASIC13.03□□□□□ -0.32
LTAP01374 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.03□□□□□ -0.32
LTAP01374 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LTAP01374 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.03□□□□□ -0.32
LTAP01374 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
LTAP01374 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
LTAP01374 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LTAP01374 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
LTAP01374 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LTAP01374 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.02□□□□□ -0.32
LTAP01374 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LTAP01374 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LTAP01374 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LTAP01374 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.02□□□□□ -0.33
LTAP01374 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 COX5BP2-201ENST00000392354 334 ntBASIC13.02□□□□□ -0.33
LTAP01374 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LTAP01374 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 AL390955.1-201ENST00000428694 934 ntBASIC13.02□□□□□ -0.33
LTAP01374 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 AC128688.1-201ENST00000487626 519 ntBASIC13.02□□□□□ -0.33
LTAP01374 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 AP002490.2-201ENST00000524791 560 ntBASIC13.02□□□□□ -0.33
LTAP01374 MIR4651-201ENST00000582622 73 ntBASIC13.02□□□□□ -0.33
LTAP01374 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 LINC00554-201ENST00000564841 3011 ntBASIC13.02□□□□□ -0.33
LTAP01374 MST1L-201ENST00000442552 2185 ntBASIC13.02□□□□□ -0.33
LTAP01374 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LTAP01374 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LTAP01374 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
LTAP01374 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LTAP01374 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.01□□□□□ -0.33
LTAP01374 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LTAP01374 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LTAP01374 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.01□□□□□ -0.33
LTAP01374 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
LTAP01374 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.01□□□□□ -0.33
LTAP01374 AC092364.2-201ENST00000596710 2692 ntBASIC13.01□□□□□ -0.33
LTAP01374 AC132872.4-202ENST00000622924 2756 ntBASIC13.01□□□□□ -0.33
LTAP01374 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LTAP01374 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms