Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH8O95206 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH8O95206 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH8O95206 AC010654.1-201ENST00000615722 808 ntBASIC17.26■□□□□ 0.35
PCDH8O95206 AC026471.1-201ENST00000564629 3026 ntBASIC17.26■□□□□ 0.35
PCDH8O95206 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDH8O95206 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDH8O95206 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 LYSMD4-203ENST00000378904 2122 ntBASIC17.26■□□□□ 0.35
PCDH8O95206 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PCDH8O95206 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 AL590787.1-201ENST00000568856 1315 ntBASIC17.25■□□□□ 0.35
PCDH8O95206 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH8O95206 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH8O95206 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDH8O95206 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.25■□□□□ 0.35
PCDH8O95206 UPF3AP3-201ENST00000420996 769 ntBASIC17.25■□□□□ 0.35
PCDH8O95206 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH8O95206 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH8O95206 AC018845.2-201ENST00000568326 409 ntBASIC17.25■□□□□ 0.35
PCDH8O95206 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH8O95206 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDH8O95206 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDH8O95206 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH8O95206 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDH8O95206 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PCDH8O95206 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PCDH8O95206 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDH8O95206 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 AC004832.2-201ENST00000426397 482 ntBASIC17.24■□□□□ 0.35
PCDH8O95206 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH8O95206 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH8O95206 HCG4B-203ENST00000450128 991 ntBASIC17.24■□□□□ 0.35
PCDH8O95206 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH8O95206 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH8O95206 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH8O95206 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH8O95206 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH8O95206 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH8O95206 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH8O95206 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.24■□□□□ 0.35
PCDH8O95206 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH8O95206 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH8O95206 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDH8O95206 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PCDH8O95206 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PCDH8O95206 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH8O95206 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH8O95206 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDH8O95206 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH8O95206 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PCDH8O95206 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDH8O95206 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH8O95206 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH8O95206 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH8O95206 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH8O95206 MTDHP5-201ENST00000598980 586 ntBASIC17.23■□□□□ 0.35
PCDH8O95206 CROCCP1-201ENST00000426910 5675 ntBASIC17.23■□□□□ 0.35
PCDH8O95206 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH8O95206 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH8O95206 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH8O95206 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms