Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC027601.4-201ENST00000611259 610 ntBASIC17.61■□□□□ 0.41
CLDN11O75508 AC004790.2-201ENST00000623588 572 ntBASIC17.61■□□□□ 0.41
CLDN11O75508 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN11O75508 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLDN11O75508 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN11O75508 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN11O75508 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN11O75508 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLDN11O75508 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN11O75508 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN11O75508 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN11O75508 PP12613-201ENST00000424958 2230 ntBASIC17.6■□□□□ 0.41
CLDN11O75508 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN11O75508 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLDN11O75508 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CLDN11O75508 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.6■□□□□ 0.41
CLDN11O75508 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN11O75508 AL591424.1-201ENST00000442569 1213 ntBASIC17.6■□□□□ 0.41
CLDN11O75508 MIR4751-201ENST00000578027 74 ntBASIC17.6■□□□□ 0.41
CLDN11O75508 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN11O75508 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN11O75508 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN11O75508 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN11O75508 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN11O75508 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN11O75508 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN11O75508 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN11O75508 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN11O75508 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.59■□□□□ 0.41
CLDN11O75508 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 CRYGEP-201ENST00000412192 528 ntBASIC17.59■□□□□ 0.41
CLDN11O75508 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDN11O75508 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 AC010654.1-201ENST00000615722 808 ntBASIC17.59■□□□□ 0.41
CLDN11O75508 FAM197Y3-203ENST00000618346 717 ntBASIC17.59■□□□□ 0.41
CLDN11O75508 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CLDN11O75508 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN11O75508 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN11O75508 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN11O75508 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN11O75508 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN11O75508 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CLDN11O75508 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLDN11O75508 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN11O75508 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
CLDN11O75508 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN11O75508 MED15P5-201ENST00000423150 992 ntBASIC17.58■□□□□ 0.4
CLDN11O75508 VN2R19P-201ENST00000442399 1052 ntBASIC17.58■□□□□ 0.4
CLDN11O75508 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLDN11O75508 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN11O75508 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN11O75508 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN11O75508 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLDN11O75508 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN11O75508 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN11O75508 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN11O75508 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN11O75508 PCDHB18P-201ENST00000524813 2368 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms