Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC008608.2-201ENST00000606089 416 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 AL356309.3-201ENST00000624132 1934 ntBASIC15.41■□□□□ 0.06
TRAF3IP2O43734 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP2O43734 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 NKAPP1-205ENST00000585790 367 ntBASIC15.4■□□□□ 0.06
TRAF3IP2O43734 LINC01711-201ENST00000598340 967 ntBASIC15.4■□□□□ 0.06
TRAF3IP2O43734 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP2O43734 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
TRAF3IP2O43734 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.39■□□□□ 0.05
TRAF3IP2O43734 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 AC097637.2-201ENST00000624096 1997 ntBASIC15.39■□□□□ 0.05
TRAF3IP2O43734 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 PRYP5-201ENST00000451909 266 ntBASIC15.39■□□□□ 0.05
TRAF3IP2O43734 UNC93B7-201ENST00000509439 705 ntBASIC15.39■□□□□ 0.05
TRAF3IP2O43734 SART3-203ENST00000546611 1184 ntBASIC15.39■□□□□ 0.05
TRAF3IP2O43734 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 AL022326.1-202ENST00000641533 845 ntBASIC15.39■□□□□ 0.05
TRAF3IP2O43734 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP2O43734 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP2O43734 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP2O43734 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP2O43734 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP2O43734 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP2O43734 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms