Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.27■□□□□ 0.36
CFAP99D6REC4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.27■□□□□ 0.36
CFAP99D6REC4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.27■□□□□ 0.35
CFAP99D6REC4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP99D6REC4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP99D6REC4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP99D6REC4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP99D6REC4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP99D6REC4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.27■□□□□ 0.35
CFAP99D6REC4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFAP99D6REC4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CFAP99D6REC4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SPDYE21P-201ENST00000413323 827 ntBASIC17.26■□□□□ 0.35
CFAP99D6REC4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SCARNA2-201ENST00000458748 420 ntBASIC17.26■□□□□ 0.35
CFAP99D6REC4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 MTDHP3-201ENST00000594186 672 ntBASIC17.26■□□□□ 0.35
CFAP99D6REC4 AC008608.2-201ENST00000606089 416 ntBASIC17.26■□□□□ 0.35
CFAP99D6REC4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 AC016396.2-201ENST00000562575 1417 ntBASIC17.26■□□□□ 0.35
CFAP99D6REC4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CFAP99D6REC4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFAP99D6REC4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.25■□□□□ 0.35
CFAP99D6REC4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 KRT126P-201ENST00000549467 1181 ntBASIC17.25■□□□□ 0.35
CFAP99D6REC4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 AL355877.3-201ENST00000622820 899 ntBASIC17.25■□□□□ 0.35
CFAP99D6REC4 AL139288.1-201ENST00000623748 933 ntBASIC17.25■□□□□ 0.35
CFAP99D6REC4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFAP99D6REC4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.25■□□□□ 0.35
CFAP99D6REC4 AC079776.2-201ENST00000641154 1609 ntBASIC17.25■□□□□ 0.35
CFAP99D6REC4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms