Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.84■□□□□ 0.29
C4orf47A7E2U8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 RBPMS2P1-201ENST00000437762 623 ntBASIC16.84■□□□□ 0.29
C4orf47A7E2U8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 AC140878.1-201ENST00000565277 250 ntBASIC16.84■□□□□ 0.29
C4orf47A7E2U8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 AC100803.2-201ENST00000562459 1963 ntBASIC16.84■□□□□ 0.29
C4orf47A7E2U8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
C4orf47A7E2U8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C4orf47A7E2U8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.83■□□□□ 0.29
C4orf47A7E2U8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
C4orf47A7E2U8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C4orf47A7E2U8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.83■□□□□ 0.29
C4orf47A7E2U8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
C4orf47A7E2U8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 RN7SL589P-201ENST00000481268 310 ntBASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AC243562.1-201ENST00000560672 389 ntBASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AC027307.3-201ENST00000594262 1100 ntBASIC16.83■□□□□ 0.28
C4orf47A7E2U8 AL358472.5-202ENST00000641448 1267 ntBASIC16.83■□□□□ 0.28
C4orf47A7E2U8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf47A7E2U8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 AC135050.7-201ENST00000624508 2218 ntBASIC16.82■□□□□ 0.28
C4orf47A7E2U8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms