Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 LINC00304-203ENST00000565008 1864 ntBASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 PDPK2P-202ENST00000562415 1191 ntBASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 AC006116.8-202ENST00000587620 1550 ntBASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3FA6NER0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 LYSMD4-203ENST00000378904 2122 ntBASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 CEND1P1-201ENST00000451006 455 ntBASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 AC074386.1-202ENST00000463561 864 ntBASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 YBX1P5-201ENST00000509441 847 ntBASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3FA6NER0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 AL355312.1-201ENST00000407115 2176 ntBASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 MKNK2P1-201ENST00000437526 628 ntBASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 AP006288.1-201ENST00000446065 395 ntBASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms