Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RCCD1A6NED2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RCCD1A6NED2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 AC017007.3-201ENST00000479865 435 ntBASIC18.35■□□□□ 0.53
RCCD1A6NED2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 AL592071.1-201ENST00000611956 408 ntBASIC18.35■□□□□ 0.53
RCCD1A6NED2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 ALOX12P2-203ENST00000570921 1945 ntBASIC18.35■□□□□ 0.53
RCCD1A6NED2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
RCCD1A6NED2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCCD1A6NED2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.35■□□□□ 0.53
RCCD1A6NED2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 AC009336.1-201ENST00000608941 1553 ntBASIC18.34■□□□□ 0.53
RCCD1A6NED2 AC007950.2-201ENST00000615045 2347 ntBASIC18.34■□□□□ 0.53
RCCD1A6NED2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 AC103564.2-201ENST00000432853 1299 ntBASIC18.34■□□□□ 0.53
RCCD1A6NED2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 AC091607.1-201ENST00000490318 1060 ntBASIC18.34■□□□□ 0.53
RCCD1A6NED2 AC124864.1-201ENST00000623408 392 ntBASIC18.34■□□□□ 0.53
RCCD1A6NED2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms