Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC25.78■■□□□ 1.72
CDC42BPBQ9Y5S2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.78■■□□□ 1.72
CDC42BPBQ9Y5S2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPBQ9Y5S2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC25.78■■□□□ 1.72
CDC42BPBQ9Y5S2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPBQ9Y5S2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPBQ9Y5S2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDC42BPBQ9Y5S2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 BANF1P1-201ENST00000553684 263 ntBASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 AL138828.2-201ENST00000615812 383 ntBASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 AC105233.2-201ENST00000523697 349 ntBASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 AF228730.5-201ENST00000530288 346 ntBASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 AC007967.4-201ENST00000614700 386 ntBASIC25.77■■□□□ 1.72
CDC42BPBQ9Y5S2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDC42BPBQ9Y5S2 AC131009.4-201ENST00000624048 1740 ntBASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 AC004840.1-201ENST00000636359 365 ntBASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 AL355312.1-201ENST00000407115 2176 ntBASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC25.75■■□□□ 1.71
CDC42BPBQ9Y5S2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AC004790.1-201ENST00000612686 536 ntBASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 BICD1-207ENST00000551848 1962 ntBASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AL138918.1-201ENST00000568306 659 ntBASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 AC073389.1-201ENST00000595595 795 ntBASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPBQ9Y5S2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 AC009477.1-201ENST00000452936 217 ntBASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC25.73■■□□□ 1.71
CDC42BPBQ9Y5S2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CDC42BPBQ9Y5S2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42BPBQ9Y5S2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CDC42BPBQ9Y5S2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms