Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 PMPCAP1-201ENST00000508114 1576 ntBASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 AC099398.1-201ENST00000567919 2776 ntBASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 AC004817.3-201ENST00000602957 2129 ntBASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RPH3AQ9Y2J0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 AC133963.1-201ENST00000504166 1679 ntBASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 PMS2P1-201ENST00000431037 1228 ntBASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 FAM197Y8-203ENST00000450145 560 ntBASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 BX005266.1-201ENST00000473402 457 ntBASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 AC120114.3-201ENST00000611923 658 ntBASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 LINC01451-201ENST00000623792 534 ntBASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.9■□□□□ 0.14
RPH3AQ9Y2J0 AC139713.2-201ENST00000641328 2723 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 AC132938.5-201ENST00000624980 1813 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 MRPL3P1-201ENST00000400109 1033 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 SCARNA2-201ENST00000458748 420 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 SART3-203ENST00000546611 1184 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 NKAPP1-205ENST00000585790 367 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 AL353593.2-201ENST00000602529 1483 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 HLA-A-201ENST00000376802 1334 ntBASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPH3AQ9Y2J0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms